PHATRDRAFT_36226 ribosomal protein l18a (RPL20A)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_36226	chr_9	ribosomal protein l18a (RPL20A)	856716	857267	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0151

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0210	0.20	0.00083 1.9

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RPL20A		Ribosomal protein L20A (L18A) [Translation, ribosomal structure and biogenesis]	cl00945	72.7899	3.63E-17	73 - 153	specific	225068
Ribosomal_L18ae superfamily		Ribosomal L18ae/LX protein domain; This family includes eukaryotic L18ae as well as archaebacterial...	-	72.7899	3.63E-17	73 - 153	superfamily	260714

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
40329		Not available	273885	302544	420028	Cre01.g047750.t1.2	AT1G29965.1	354168

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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