PHATRDRAFT_39236 calcium calmodulin dependent protein kinaseassociation-domain protein (CaMKII_AD superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_39236	chr_18	calcium calmodulin dependent protein kinaseassociation-domain protein (CaMKII_AD superfamily)	686308	687369	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0418

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0027	0.44	23000 100000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NTF2_like		Nuclear transport factor 2 (NTF2-like) superfamily. This family includes members of the NTF2 family...	cl09109	34.798	0.00762565	218 - 324	specific	238296
NTF2_like superfamily		Nuclear transport factor 2 (NTF2-like) superfamily. This family includes members of the NTF2 family...	-	34.798	0.00762565	218 - 324	superfamily	263720
CaMKII_AD superfamily		Calcium/calmodulin dependent protein kinase II Association; This domain is found at the C-terminus...	-	145.516	4.12E-42	86 - 206	superfamily	266735

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
264181		Not available	270236	238352	Not available	Cre16.g661750.t1.2	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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