PHATRDRAFT_39714 dead (asp-glu-ala-asp) box polypeptide 28 (DEXDc superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_39714 chr_20 dead (asp-glu-ala-asp) box polypeptide 28 (DEXDc superfamily) 526687 528282 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0141

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0154
 0.20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 98.0788 3.79E-24 333 - 440 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 98.0788 3.79E-24 333 - 440 superfamily 238034
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 175.366 2.88E-51 31 - 259 superfamily 266587
DEXDc DEAD-like helicases superfamily; DEAD-like helicases superfamily. - 141.09 7.44E-39 51 - 262 multi-dom 214692

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
4624 Not available 158140 295655 431737 Cre01.g033832.t1.1 AT4G09730.1 350808

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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