PHATRDRAFT_40052 polysaccharide deacetylase family protein (uraD_N-term-dom)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_40052	chr_22	polysaccharide deacetylase family protein (uraD_N-term-dom)	33053	34348	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0231

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0126	0.29	160 17000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CE4_PuuE_SpCDA1		Catalytic domain of bacterial PuuE allantoinases, Schizosaccharomyces pombe chitin deacetylase 1 (...	cl15692	419.423	1.03E-146	36 - 334	specific	200599
CE4_SF superfamily		Catalytic NodB homology domain of the carbohydrate esterase 4 superfamily; The carbohydrate...	-	419.423	1.03E-146	36 - 334	superfamily	265761
uraD_N-term-dom		putative urate catabolism protein; This model represents a protein that is predominantly found just...	-	449.171	4.65E-158	22 - 341	multi-dom	211797

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
263642		Not available	252998	259103	194677	Not available	Not available	346147

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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