PHATRDRAFT_40154 ubiquitin specific peptidasex-isoform 1 (Peptidase_C19 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_40154	chr_22	ubiquitin specific peptidasex-isoform 1 (Peptidase_C19 superfamily)	274675	275681	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0353

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0110	0.50	21000 23000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Peptidase_C19 superfamily		Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove...	-	161.656	1.61E-46	43 - 292	superfamily	261337
UCH		Ubiquitin carboxyl-terminal hydrolase; Ubiquitin carboxyl-terminal hydrolase.	-	142.932	1.04E-39	42 - 289	multi-dom	249862

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
21460		Not available	140767	165362	Not available	Not available	AT5G06600.2	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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