PHATRDRAFT_4129 camp-dependent protein kinase (STKc_AGC)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_4129	chr_6	camp-dependent protein kinase (STKc_AGC)	782343	783281	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0374

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0031	0.36	0.0019 46000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
STKc_AGC		Catalytic domain of AGC family Protein Serine/Threonine Kinases; Serine/Threonine Kinases (STKs),...	cl09925	373.779	1.07E-130	5 - 258	specific	173660
PKc_like superfamily		Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the...	-	373.779	1.07E-130	5 - 258	superfamily	263920
S_TKc		Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-...	-	296.749	2.42E-100	1 - 258	multi-dom	214567

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
33728		Not available	204913	256856	Not available	Not available	Not available	566362

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments