PHATRDRAFT_41812 succinate dehydrogenase flavoprotein alpha subunit (PLN00128)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_41812	chr_3	succinate dehydrogenase flavoprotein alpha subunit (PLN00128)	1284704	1287657	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0156

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0023	0.40

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PRK06175 superfamily		L-aspartate oxidase; Provisional	-	252.298	2.07E-76	46 - 462	superfamily	180442
Succ_DH_flav_C superfamily		Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate...	-	173.954	2.66E-51	503 - 638	superfamily	251613
Succ_DH_flav_C superfamily		Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate...	-	173.954	2.66E-51	503 - 638	superfamily	251613
PLN00128		Succinate dehydrogenase [ubiquinone] flavoprotein subunit	-	1248.98	0	3 - 638	multi-dom	177739

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
42475		Not available	204348	299232	450514	Cre14.g619133.t1.1	AT5G66760.1	248886

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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