PHATRDRAFT_42592 denn madd domain containing 1c (DENN superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_42592	chr_1	denn madd domain containing 1c (DENN superfamily)	522604	526448	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0240

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DENN superfamily		DENN (AEX-3) domain; DENN (after differentially expressed in neoplastic vs normal cells) is a...	-	104.585	4.54E-25	387 - 493	superfamily	264408
VHS_ENTH_ANTH superfamily		VHS, ENTH and ANTH domain superfamily; composed of proteins containing a VHS, ENTH or ANTH domain....	-	61.0286	7.11E-11	764 - 876	superfamily	261334
dDENN superfamily		dDENN domain; This region is always found associated with pfam02141. It is predicted to form a...	-	51.4417	6.18E-08	628 - 697	superfamily	262010

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
4455		Not available	224959	212851	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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