PHATRDRAFT_42677 at4g27720 t29a15_210 (SAP)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_42677 chr_1 at4g27720 t29a15_210 (SAP) 763427 765135 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0112

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0144
 0.19

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 39.6045 0.00143842 141 - 291 superfamily 119392
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 39.6045 0.00143842 141 - 291 superfamily 119392
SAP SAP domain; The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding domain... cl02640 57.0068 1.53E-10 75 - 106 specific 251054
SAP superfamily SAP domain; The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding domain... - 57.0068 1.53E-10 75 - 106 superfamily 261387
MFS_1 Major Facilitator Superfamily; Major Facilitator Superfamily. - 58.9704 1.00E-09 141 - 488 multi-dom 254360

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
261403 Not available 190838 323792 Not available Not available Not available 467901

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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