PHATRDRAFT_42834 kelch motif family protein (BTB)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_42834 chr_1 kelch motif family protein (BTB) 1271717 1273636 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0046

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0223
 0.26

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
BTB Broad-Complex, Tramtrack and Bric a brac; Domain in Broad-Complex, Tramtrack and Bric a brac. Also... cl02518 97.3764 4.93E-24 483 - 580 specific 197585
BTB superfamily BTB/POZ domain; The BTB (for BR-C, ttk and bab) or POZ (for Pox virus and Zinc finger) domain is... - 97.3764 4.93E-24 483 - 580 superfamily 261320
Kelch_3 Galactose oxidase, central domain; Galactose oxidase, central domain. cl02701 51.5213 1.86E-08 226 - 276 specific 257740
Kelch_3 superfamily Galactose oxidase, central domain; Galactose oxidase, central domain. - 35.6766 0.00426995 363 - 400 superfamily 261412
BACK BTB And C-terminal Kelch; The BACK domain is found juxtaposed to the BTB domain; they are separated... cl06652 48.4916 4.30E-07 587 - 638 specific 197943
BACK superfamily BTB And C-terminal Kelch; This domain is found associated with pfam00651 and pfam01344. The BACK... - 48.4916 4.30E-07 587 - 638 superfamily 262970
Kelch_4 Galactose oxidase, central domain; Galactose oxidase, central domain. cl02701 44.5528 4.87E-06 267 - 310 specific 257743
Kelch_3 superfamily Galactose oxidase, central domain; Galactose oxidase, central domain. - 35.6766 0.00426995 363 - 400 superfamily 261412
Kelch_1 Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six... cl02701 39.5703 0.000213961 421 - 453 specific 250548
Kelch_3 superfamily Galactose oxidase, central domain; Galactose oxidase, central domain. - 35.6766 0.00426995 363 - 400 superfamily 261412

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
5743 Not available 181279 250957 458743 Not available AT1G18610.1 323948

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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