PHATRDRAFT_42968 dna ligase
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_42968 chr_1 dna ligase 1657725 1659603 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0058

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play... cl02542 38.2953 0.000554503 32 - 64 specific 99751
DnaJ superfamily DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play... - 38.2953 0.000554503 32 - 64 superfamily 261333
BRCT Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within... cl00038 36.9159 0.00171669 292 - 374 specific 237994
BRCT superfamily Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within... - 36.9159 0.00171669 292 - 374 superfamily 260149
zf-PARP superfamily Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region; Poly(ADP-ribose) polymerase is an... - 40.3436 0.000132204 119 - 169 superfamily 250026

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
10876 Not available 263552 Not available 233298 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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