PHATRDRAFT_43179 microrchidia 4 (zf-CW)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43179 chr_1 microrchidia 4 (zf-CW) 2250512 2251749 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0038

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0249
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
zf-CW superfamily CW-type Zinc Finger; This domain appears to be a zinc finger. The alignment shows four conserved... - 42.8099 7.74E-06 319 - 371 superfamily 254236
zf-CW superfamily CW-type Zinc Finger; This domain appears to be a zinc finger. The alignment shows four conserved... - 42.8099 7.74E-06 319 - 371 superfamily 254236
zf-CW superfamily CW-type Zinc Finger; This domain appears to be a zinc finger. The alignment shows four conserved... - 42.8099 7.74E-06 319 - 371 superfamily 254236
Collagen_bind_2 superfamily Putative collagen-binding domain of a collagenase; This domain is likely to be the collagen-binding... - 35.3863 0.00355454 104 - 137 superfamily 257391

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
21875 Not available 232825 180185 110123 Not available Not available 486618

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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