PHATRDRAFT_43211 ww domain protein (PRP40)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43211 chr_1 ww domain protein (PRP40) 2321099 2323579 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0393

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WW Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids;... cl00157 44.8262 3.76E-06 310 - 336 specific 238122
WW superfamily Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids;... - 44.8262 3.76E-06 310 - 336 superfamily 260224
FF FF domain; This domain has been predicted to be involved in protein-protein interaction. This... cl02610 36.6573 0.00314753 646 - 699 specific 250912
FF superfamily FF domain; This domain has been predicted to be involved in protein-protein interaction. This... - 36.6573 0.00314753 646 - 699 superfamily 261370
FF FF domain; This domain has been predicted to be involved in protein-protein interaction. This... cl02610 36.6573 0.00314753 646 - 699 specific 250912
FF superfamily FF domain; This domain has been predicted to be involved in protein-protein interaction. This... - 36.6573 0.00314753 646 - 699 superfamily 261370
FF FF domain; This domain has been predicted to be involved in protein-protein interaction. This... cl02610 36.6573 0.00314753 646 - 699 specific 250912
FF superfamily FF domain; This domain has been predicted to be involved in protein-protein interaction. This... - 36.6573 0.00314753 646 - 699 superfamily 261370
PRP40 Splicing factor [RNA processing and modification] - 117.104 1.67E-27 310 - 716 multi-dom 227435
Pro-rich Proline-rich; This family includes several eukaryotic proline-rich proteins. - 39.1706 0.00140939 109 - 194 multi-dom 259374

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
21860 Not available 136475 297279 Not available Cre07.g351000.t1.1 AT1G44910.2 344681

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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