PHATRDRAFT_43336 (DUF3414 superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43336	chr_2	(DUF3414 superfamily)	142484	149388	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0112

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0123	0.20	1.1 4.6

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF3414 superfamily		Protein of unknown function (DUF3414); This family of proteins are functionally uncharacterized....	-	76.9878	5.29E-14	711 - 1154	superfamily	256706
Nucleoporin_FG superfamily		Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in...	-	49.7379	7.97E-07	36 - 148	superfamily	257944
Nucleoporin_FG superfamily		Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in...	-	49.7379	7.97E-07	36 - 148	superfamily	257944

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
25795		Not available	259775	254700	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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