PHATRDRAFT_43377 sel1-like repeat (COG0790)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43377	chr_2	sel1-like repeat (COG0790)	284652	286110	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0240

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0118	0.28	140 210

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
COG0790		FOG: TPR repeat, SEL1 subfamily [General function prediction only]	-	48.5019	1.41E-06	63 - 309	multi-dom	223861
COG0790		FOG: TPR repeat, SEL1 subfamily [General function prediction only]	-	48.5019	1.41E-06	63 - 309	multi-dom	223861

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3280		Not available	278635	308816	Not available	Not available	Not available	311534

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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