PHATRDRAFT_43429 chorismate synthase (Chorismate_synthase)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43429	chr_2	chorismate synthase (Chorismate_synthase)	437214	438709	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0153

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0098	0.29	990 110

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Chorismate_synthase		Chorismase synthase, the enzyme catalyzing the final step of the shikimate pathway; Chorismate...	cl00323	540.468	0	34 - 380	specific	143612
Chorismate_synthase superfamily		Chorismase synthase, the enzyme catalyzing the final step of the shikimate pathway; Chorismate...	-	540.468	0	34 - 380	superfamily	260354

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
38964		Not available	202541	199105	453474	Cre03.g145747.t1.1	AT1G48850.1	497112

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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