PHATRDRAFT_43560 2-nitropropane dioxygenase npd (NPD_like)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43560	chr_2	2-nitropropane dioxygenase npd (NPD_like)	817145	818230	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0044

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0034	0.35	0.0082 2500

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NPD_like		2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes...	cl17186	227.366	2.57E-72	17 - 239	specific	240081
TIM_phosphate_binding superfamily		TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an...	-	227.366	2.57E-72	17 - 239	superfamily	266538
COG2070		Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]	-	209.107	5.46E-64	7 - 350	multi-dom	224981

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
10115		Not available	257778	218971	452061	Not available	AT5G64250.2	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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