PHATRDRAFT_43576 prp31 pre-mrna processing factor 31 homolog (Nop superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43576 chr_2 prp31 pre-mrna processing factor 31 homolog (Nop superfamily) 854421 856082 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0029

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Nop superfamily Putative snoRNA binding domain; This family consists of various Pre RNA processing... - 128.944 2.58E-35 192 - 338 superfamily 250875
Prp31_C superfamily Prp31 C terminal domain; This is the C terminal domain of the pre-mRNA processing factor Prp31.... - 57.3412 3.97E-10 345 - 455 superfamily 255552
NOSIC superfamily NOSIC (NUC001) domain; This is the central domain in Nop56/SIK1-like proteins. - 39.8012 0.000145165 90 - 141 superfamily 263088

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
6052 Not available 201254 320421 427076 Cre10.g424850.t1.2 AT1G60170.1 468703

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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