PHATRDRAFT_43579 lethal in the absence of ssd1-v (Las1 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43579	chr_2	lethal in the absence of ssd1-v (Las1 superfamily)	866571	868676	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0141

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0124	0.32	19000 62000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Las1 superfamily		Las1-like; Las1 is an essential nuclear protein involved in cell morphogenesis and cell surface...	-	135.48	7.21E-37	99 - 221	superfamily	252327

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
5666		Not available	261647	237155	245610	Cre01.g002201.t1.2	AT5G12220.1	553315

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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