PHATRDRAFT_43673 rhomboid family protein ubiquitin-associated ts-n domain-containing protein (Rhomboid superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43673	chr_2	rhomboid family protein ubiquitin-associated ts-n domain-containing protein (Rhomboid superfamily)	1153298	1154212	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0412

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0187	0.25	2000 160000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Rhomboid superfamily		Rhomboid family; This family contains integral membrane proteins that are related to Drosophila...	-	74.567	1.07E-16	47 - 193	superfamily	264372

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
5695		Not available	150492	323098	Not available	Cre01.g050350.t1.1	AT3G58460.1	507191

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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