PHATRDRAFT_43713 u3 small nucleolarhomolog (UTP15_C)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43713 chr_2 u3 small nucleolarhomolog (UTP15_C) 1257858 1259687 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0137

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0160
 0.36

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UTP15_C superfamily UTP15 C terminal; U3 snoRNA is ubiquitous in eukaryotes and is required for nucleolar processing of... - 156.536 8.77E-45 452 - 599 superfamily 255334
UTP15_C superfamily UTP15 C terminal; U3 snoRNA is ubiquitous in eukaryotes and is required for nucleolar processing of... - 156.536 8.77E-45 452 - 599 superfamily 255334
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 97.4056 1.50E-22 151 - 426 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 69.7323 6.16E-13 144 - 486 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
269030 Not available 224661 55557 204380 Cre03.g196850.t1.2 AT2G47990.1 356172

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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