PHATRDRAFT_44256 myb-like dna-bindingshaqkyf class family protein (SANT)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44256 chr_4 myb-like dna-bindingshaqkyf class family protein (SANT) 22449 24143 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0365

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0198
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain... cl17250 52.5778 6.38E-09 309 - 352 specific 238096
SANT superfamily 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain... - 52.5778 6.38E-09 309 - 352 superfamily 266586
DASH_Spc34 superfamily DASH complex subunit Spc34; The DASH complex is a ~10 subunit microtubule-binding complex that is... - 36.6346 0.00743181 416 - 493 superfamily 254954

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
268788 Not available 165255 145145 Not available Not available AT5G17300.1 373030

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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