PHATRDRAFT_44311 sam-dependent methyltransferase-like (COG1092)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44311	chr_4	sam-dependent methyltransferase-like (COG1092)	200929	202791	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0141

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0098	0.29	990 110

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RlmI_M_like superfamily		Middle domain of the SAM-dependent methyltransferase RlmI and related proteins; This middle or...	-	64.0208	1.80E-12	291 - 367	superfamily	211413
RlmI_M_like superfamily		Middle domain of the SAM-dependent methyltransferase RlmI and related proteins; This middle or...	-	64.0208	1.80E-12	291 - 367	superfamily	211413
AdoMet_MTases		S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases...	cl17173	54.3583	4.35E-09	438 - 517	specific	100107
AdoMet_MTases superfamily		S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases...	-	54.3583	4.35E-09	438 - 517	superfamily	266528
COG1092		Predicted SAM-dependent methyltransferases [General function prediction only]	-	220.645	3.94E-65	293 - 617	multi-dom	224017

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
35911		Not available	186233	225830	52931	Cre16.g649400.t1.2	AT1G54310.2	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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