PHATRDRAFT_44323 ubiquitin familyexpressed (UBL)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44323 chr_4 ubiquitin familyexpressed (UBL) 234828 236672 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0488

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UBL Ubiquitin-like domain of UBL; UBLs function by remodeling the surface of their target proteins,... cl00155 62.2846 5.08E-12 17 - 91 specific 176364
UBQ superfamily Ubiquitin-like proteins; Ubiquitin homologs; Includes ubiquitin and ubiquitin-like proteins.... - 62.2846 5.08E-12 17 - 91 superfamily 260222
UBA Ubiquitin Associated domain. The UBA domain is a commonly occurring sequence motif in some members... cl00153 40.1351 0.000110041 537 - 575 specific 238116
UBA superfamily Ubiquitin Associated domain. The UBA domain is a commonly occurring sequence motif in some members... - 40.1351 0.000110041 537 - 575 superfamily 260220
XPC-binding superfamily XPC-binding domain; Members of this family adopt a structure consisting of four alpha helices,... - 34.8991 0.00907211 396 - 448 superfamily 192241
XPC-binding superfamily XPC-binding domain; Members of this family adopt a structure consisting of four alpha helices,... - 34.8991 0.00907211 396 - 448 superfamily 192241
rad23 UV excision repair protein Rad23; All proteins in this family for which functions are known are... - 51.4352 3.24E-07 15 - 278 multi-dom 233045

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
21756 Not available 260697 297857 116658 Cre15.g637100.t1.2 AT2G17190.1 354538

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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