PHATRDRAFT_44406 (GalK)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44406 chr_4 (GalK) 449850 455748 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0061

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GHMP_kinases_N superfamily GHMP kinases N terminal domain; This family includes homoserine kinases, galactokinases and... - 46.0072 5.54E-06 1525 - 1587 superfamily 249743
GHMP_kinases_N superfamily GHMP kinases N terminal domain; This family includes homoserine kinases, galactokinases and... - 46.0072 5.54E-06 1525 - 1587 superfamily 249743
GrpE superfamily GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases. The GrpE dimer binds... - 40.4864 0.00162957 641 - 756 superfamily 261574
DUF3714 superfamily Protein of unknown function (DUF3714); This domain family is found in bacteria, and is... - 41.2542 0.00193876 178 - 368 superfamily 268262
GalK Galactokinase [Carbohydrate transport and metabolism] - 80.0415 9.37E-16 1420 - 1772 multi-dom 223231
SCP-1 Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major... - 59.3501 7.01E-09 35 - 496 multi-dom 114219
SMC_prok_B chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of... - 45.4324 0.000148629 263 - 933 multi-dom 233757

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
20884 Not available Not available 310849 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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