PHATRDRAFT_44512 ampk-activated protein kinase gamma-1 subunit (CBS_pair superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44512 chr_4 ampk-activated protein kinase gamma-1 subunit (CBS_pair superfamily) 775352 776502 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0041

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0253
 0.20

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CBS_pair superfamily The CBS domain, named after human CBS, is a small domain originally identified in cystathionine... - 70.7327 1.96E-15 48 - 179 superfamily 265675
CBS_pair superfamily The CBS domain, named after human CBS, is a small domain originally identified in cystathionine... - 70.7327 1.96E-15 48 - 179 superfamily 265675
COG0517 FOG: CBS domain [General function prediction only] - 63.6445 1.07E-12 205 - 330 multi-dom 223591

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
2380 Not available 219901 213623 Not available Cre12.g484350.t1.1 AT1G09020.1 491614

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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