PHATRDRAFT_44527 (Trypsin_2)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44527 chr_4 (Trypsin_2) 809000 813601 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0352

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0185
 0.34

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Trypsin_2 Trypsin-like peptidase domain; This family includes trypsin like peptidase domains. cl19303 61.4902 9.08E-11 1283 - 1490 specific 257693
Trypsin_2 superfamily Trypsin-like peptidase domain; This family includes trypsin like peptidase domains. - 61.4902 9.08E-11 1283 - 1490 superfamily 267656
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 54.6495 2.00E-08 547 - 773 superfamily 266525
Tri3 superfamily 15-O-acetyltransferase Tri3; This family represents a conserved region approximately 400 residues... - 43.1031 0.000450705 615 - 865 superfamily 148818

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22549 Not available 243240 288591 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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