PHATRDRAFT_44629 lipopolysaccharide a protein (CAP10 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44629	chr_4	lipopolysaccharide a protein (CAP10 superfamily)	1097093	1098520	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0018

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0111	0.46	1.8 200000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CAP10 superfamily		Putative lipopolysaccharide-modifying enzyme; Putative lipopolysaccharide-modifying enzyme.	-	73.9954	3.29E-15	273 - 439	superfamily	214773

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
12025		Not available	226500	157600	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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