PHATRDRAFT_45581 tetratricopeptide repeat domain 15
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45581 chr_7 tetratricopeptide repeat domain 15 608873 610600 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0238

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 42.3672 3.56E-05 376 - 521 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 42.3672 3.56E-05 376 - 521 superfamily 238112
TPR_12 Tetratricopeptide repeat; Tetratricopeptide repeat. - 38.5122 0.000623504 377 - 460 multi-dom 257749
TPR_11 TPR repeat; TPR repeat. - 35.7523 0.00471981 429 - 520 multi-dom 257739

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
24212 Not available 243641 322487 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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