PHATRDRAFT_45626 (DUF547 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45626 chr_7 (DUF547 superfamily) 750875 756123 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0119

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0031
 0.36

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PH Pleckstrin homology (PH) domain; PH domains have diverse functions, but in general are involved in... cl17171 37.72 0.00318946 649 - 726 specific 241231
PH-like superfamily Pleckstrin homology-like domain; The PH-like family includes the PH domain, both the Shc-like and... - 37.72 0.00318946 649 - 726 superfamily 266526
DUF547 superfamily Protein of unknown function, DUF547; Family of uncharacterized proteins from C. elegans and A.... - 90.6401 8.54E-21 831 - 961 superfamily 252798
tRNA_int_endo tRNA intron endonuclease, catalytic C-terminal domain; Members of this family cleave pre tRNA at... cl10045 50.7297 2.02E-07 1399 - 1464 specific 251006
tRNA_int_endo superfamily tRNA intron endonuclease, catalytic C-terminal domain; Members of this family cleave pre tRNA at... - 50.7297 2.02E-07 1399 - 1464 superfamily 263957

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
25470 Not available 247863 12964 442069 Not available AT3G11920.1 390158

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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