PHATRDRAFT_45703 (KAT11 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45703 chr_7 (KAT11 superfamily) 982735 990323 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0315

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ZZ Zinc finger, ZZ type. Zinc finger present in dystrophin, CBP/p300 and many other proteins. The ZZ... cl00295 56.2887 2.32E-09 2249 - 2296 specific 239069
ZZ superfamily Zinc finger, ZZ type. Zinc finger present in dystrophin, CBP/p300 and many other proteins. The ZZ... - 56.2887 2.32E-09 2249 - 2296 superfamily 241760
KAT11 superfamily Histone acetylation protein; Histone acetylation is required in many cellular processes including... - 160.272 4.34E-42 1541 - 1758 superfamily 261185
Bromodomain superfamily Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone... - 107.031 2.53E-26 1251 - 1341 superfamily 261339
zf-TAZ TAZ zinc finger; The TAZ2 domain of CBP binds to other transcription factors such as the p53 tumor... cl02660 73.5519 5.02E-15 862 - 927 specific 251111
zf-TAZ superfamily TAZ zinc finger; The TAZ2 domain of CBP binds to other transcription factors such as the p53 tumor... - 52.3659 7.86E-08 2319 - 2387 superfamily 261396
zf-TAZ superfamily TAZ zinc finger; The TAZ2 domain of CBP binds to other transcription factors such as the p53 tumor... - 52.3659 7.86E-08 2319 - 2387 superfamily 261396
M_domain superfamily M domain of GW182; M domain of GW182. - 43.7189 0.000227979 116 - 270 superfamily 257419
PHD PHD zinc finger; The plant homeodomain (PHD) finger is a C4HC3 zinc-finger-like motif found in... cl17445 37.5766 0.00448768 1440 - 1480 specific 214584
PHD superfamily PHD-finger; PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner... - 37.5766 0.00448768 1440 - 1480 superfamily 266687

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
269496 Not available Not available 296830 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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