PHATRDRAFT_45854 (Nucleoporin2)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45854 chr_8 (Nucleoporin2) 472939 478008 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0130

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Nucleoporin2 superfamily Nucleoporin autopeptidase; Nucleoporin autopeptidase. - 150.84 2.14E-41 784 - 921 superfamily 252369
Nucleoporin2 superfamily Nucleoporin autopeptidase; Nucleoporin autopeptidase. - 150.84 2.14E-41 784 - 921 superfamily 252369
Nup96 superfamily Nuclear protein 96; Nup96 (often known by the name of its yeast homolog Nup145C) is part of the... - 105.52 2.78E-24 1265 - 1536 superfamily 256853
Nucleoporin_FG superfamily Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in... - 49.7379 6.10E-07 19 - 114 superfamily 257944
Nucleoporin_FG superfamily Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in... - 49.7379 6.10E-07 19 - 114 superfamily 257944
Nucleoporin_FG superfamily Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in... - 49.7379 6.10E-07 19 - 114 superfamily 257944
Nucleoporin_FG superfamily Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in... - 49.7379 6.10E-07 19 - 114 superfamily 257944
Nucleoporin_FG superfamily Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in... - 49.7379 6.10E-07 19 - 114 superfamily 257944
Nucleoporin_FG superfamily Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in... - 49.7379 6.10E-07 19 - 114 superfamily 257944

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
262891 Not available 163777 64310 Not available Cre02.g086887.t1.1 AT1G59660.1 326004

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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