PHATRDRAFT_46384 fad dependent oxidoreductase (GCV_T)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_46384 chr_10 fad dependent oxidoreductase (GCV_T) 173703 176819 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0318

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0045
 0.40

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GCV_T Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, part... cl01893 214.452 7.27E-64 575 - 787 specific 250713
GCV_T superfamily Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, part... - 214.452 7.27E-64 575 - 787 superfamily 261109
NAD_binding_8 superfamily NAD(P)-binding Rossmann-like domain; NAD(P)-binding Rossmann-like domain. - 95.8937 1.65E-21 103 - 436 superfamily 267487
GCV_T_C superfamily Glycine cleavage T-protein C-terminal barrel domain; This is a family of glycine cleavage T-... - 55.6857 2.06E-09 794 - 868 superfamily 254962
GCV_T_C superfamily Glycine cleavage T-protein C-terminal barrel domain; This is a family of glycine cleavage T-... - 55.6857 2.06E-09 794 - 868 superfamily 254962
gcvT glycine cleavage system aminomethyltransferase T; Reviewed - 188.017 1.11E-52 510 - 891 multi-dom 234742
DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] - 163.147 1.27E-43 94 - 478 multi-dom 223737

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22864 Not available Not available 294598 455971 Not available Not available 552420

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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