PHATRDRAFT_46608 deoxyxylulose-5-phosphate synthase (TIP120 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_46608	chr_10	deoxyxylulose-5-phosphate synthase (TIP120 superfamily)	884475	888806	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0174

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0220	0.29	4300 20000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TIP120 superfamily		TATA-binding protein interacting (TIP20); TIP120 (also known as cullin-associated and neddylation-...	-	92.6723	4.64E-21	1272 - 1421	superfamily	254931

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
262874		Not available	187897	254397	462184	Cre03.g177053.t1.1	AT2G02560.2	493289

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments