PHATRDRAFT_47099 conserved protein having 3 transmembrane domains and possible er retention motif possible er protein (Sec62 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47099	chr_12	conserved protein having 3 transmembrane domains and possible er retention motif possible er...	396116	397288	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0147

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0165	0.45	0.041 2100

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Sec62 superfamily		Translocation protein Sec62; Translocation protein Sec62.	-	115.665	1.75E-30	39 - 207	superfamily	261206
ProX superfamily		ABC-type proline/glycine betaine transport systems, periplasmic components [Amino acid transport...	-	36.8423	0.00441832	211 - 281	superfamily	248445

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
22579		Not available	208718	254577	469110	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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