PHATRDRAFT_47154 (PcbC)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47154 chr_12 (PcbC) 634128 636047 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0127

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0178
 0.24

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
2OG-FeII_Oxy superfamily 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... - 51.2563 4.54E-08 510 - 591 superfamily 251775
2OG-FeII_Oxy superfamily 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... - 51.2563 4.54E-08 510 - 591 superfamily 251775
DIOX_N superfamily non-haem dioxygenase in morphine synthesis N-terminal; This is the highly conserved N-terminal... - 39.1459 0.000464412 320 - 431 superfamily 258418
DIOX_N superfamily non-haem dioxygenase in morphine synthesis N-terminal; This is the highly conserved N-terminal... - 39.1459 0.000464412 320 - 431 superfamily 258418
PLPDE_IV superfamily PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV). This D-amino acid... - 37.9631 0.00446978 182 - 242 superfamily 260277
PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] - 85.4951 1.92E-18 318 - 606 multi-dom 226022

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
3998 Not available Not available 249675 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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