PHATRDRAFT_47264 transcription factor e2f dimerisation partner familyexpressed (E2F_TDP)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47264	chr_13	transcription factor e2f dimerisation partner familyexpressed (E2F_TDP)	127259	130498	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0149

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0017	0.46	260000 300000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
E2F_TDP superfamily		E2F/DP family winged-helix DNA-binding domain; This family contains the transcription factor E2F...	-	82.2299	6.80E-19	196 - 259	superfamily	251219
E2F_TDP superfamily		E2F/DP family winged-helix DNA-binding domain; This family contains the transcription factor E2F...	-	82.2299	6.80E-19	196 - 259	superfamily	251219

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
269254		Not available	235052	218699	465850	Cre01.g052300.t1.1	AT2G36010.3	313263

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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