PHATRDRAFT_47293 thiamine monophosphate synthase (HMPP_kinase)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47293 chr_13 thiamine monophosphate synthase (HMPP_kinase) 210541 212283 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0233

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0008
 0.47

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two... cl00192 253.58 8.25E-80 52 - 322 specific 238574
ribokinase_pfkB_like superfamily ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including... - 253.58 8.25E-80 52 - 322 superfamily 260247
TMP_TenI Thiamine monophosphate synthase (TMP synthase)/TenI. TMP synthase catalyzes an important step in... cl17186 164.229 5.25E-47 389 - 577 specific 238317
TIM_phosphate_binding superfamily TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an... - 164.229 5.25E-47 389 - 577 superfamily 266538
PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase - 225.418 4.28E-66 53 - 572 multi-dom 215486

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
262963 Not available 161112 320126 102278 Cre08.g365600.t1.2 AT1G22940.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments