PHATRDRAFT_47695 rna pseudouridylate synthase domain containing 1 (PseudoU_synth_RluCD_like)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47695	chr_14	rna pseudouridylate synthase domain containing 1 (PseudoU_synth_RluCD_like)	554291	555638	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0045

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PseudoU_synth_RluCD_like		Pseudouridine synthase, RsuA/RluD family; This group is comprised of eukaryotic, bacterial and...	cl00130	107.423	1.56E-27	62 - 391	specific	211346
PseudoU_synth superfamily		Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to...	-	107.423	1.56E-27	62 - 391	superfamily	260207

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
4334		Not available	259035	294425	Not available	Not available	Not available	317111

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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