PHATRDRAFT_47765 tetratricopeptide tpr_2 repeat protein (TPR_12)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47765	chr_14	tetratricopeptide tpr_2 repeat protein (TPR_12)	768859	770337	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0223

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0132	0.29	26 6900

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TPR superfamily		Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF...	-	39.2856	0.000270297	129 - 250	superfamily	238112
TPR superfamily		Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF...	-	39.2856	0.000270297	129 - 250	superfamily	238112
TPR_12		Tetratricopeptide repeat; Tetratricopeptide repeat.	-	58.9278	5.08E-11	162 - 251	multi-dom	257749

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
24686		Not available	232583	64621	Not available	Not available	Not available	529177

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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