PHATRDRAFT_47856 smad nuclear interacting protein (FHA)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47856	chr_15	smad nuclear interacting protein (FHA)	255622	256775	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0223

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0132	0.29	26 6900

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
FHA		Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear...	cl00062	78.5822	3.48E-18	115 - 212	specific	238017
FHA superfamily		Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear...	-	78.5822	3.48E-18	115 - 212	superfamily	260165
COG1716		FOG: FHA domain [Signal transduction mechanisms]	-	56.1174	1.13E-09	138 - 243	multi-dom	224630

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
22192		Not available	219568	245942	235244	Not available	Not available	560962

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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