PHATRDRAFT_47861 (KH-I)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47861 chr_15 (KH-I) 265564 269802 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0314

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
KH-I K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide... cl17245 57.1847 7.55E-10 762 - 818 specific 238053
KH-I superfamily K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide... - 57.1847 7.55E-10 762 - 818 superfamily 266583
KH-I K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide... cl17245 57.1847 7.55E-10 762 - 818 specific 238053
KH-I superfamily K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide... - 57.1847 7.55E-10 762 - 818 superfamily 266583
NOA36 superfamily NOA36 protein; This family consists of several NOA36 proteins which contain 29 highly conserved... - 44.1797 0.000140688 240 - 354 superfamily 115196
FYVE_2 superfamily FYVE-type zinc finger; This FYVE-type zinc finger is found at the N-terminus of effector proteins... - 36.1813 0.00930015 198 - 244 superfamily 251218

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
6068 Not available 242061 17858 Not available Cre06.g250800.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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