PHATRDRAFT_47959
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47959 chr_15 558455 559846 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0371

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0095
 0.39

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
pepsin_retropepsin_like superfamily Cellular and retroviral pepsin-like aspartate proteases; This family includes both cellular and... - 43.4235 9.36E-06 180 - 276 superfamily 264354
Asp_protease_2 Aspartyl protease; This family consists of predicted aspartic proteases, typically from 180 to 230... cl11403 43.4235 9.36E-06 180 - 276 specific 257959
pepsin_retropepsin_like superfamily Cellular and retroviral pepsin-like aspartate proteases; This family includes both cellular and... - 43.4235 9.36E-06 180 - 276 superfamily 264354

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
11799 Not available 249605 140448 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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