PHATRDRAFT_48145 permease of the drug metabolite transportersuperfamily (RhaT)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48145	chr_16	permease of the drug metabolite transportersuperfamily (RhaT)	337184	338572	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0229

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0103	0.38	3.8 5600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
EamA		EamA-like transporter family; This family includes many hypothetical membrane proteins of unknown...	cl17759	41.8451	3.79E-05	358 - 425	specific	250209
EamA superfamily		EamA-like transporter family; This family includes many hypothetical membrane proteins of unknown...	-	41.8451	3.79E-05	358 - 425	superfamily	266818
EamA		EamA-like transporter family; This family includes many hypothetical membrane proteins of unknown...	cl17759	41.8451	3.79E-05	358 - 425	specific	250209
EamA superfamily		EamA-like transporter family; This family includes many hypothetical membrane proteins of unknown...	-	41.8451	3.79E-05	358 - 425	superfamily	266818
RhaT		Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and...	-	66.0433	2.33E-12	107 - 429	multi-dom	223769

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
6897		Not available	190712	285610	114502	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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