PHATRDRAFT_48179 myb-like dna-binding domain containing protein
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48179	chr_16	myb-like dna-binding domain containing protein	428930	430062	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0373

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0116	0.40	900 1500

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SANT		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	cl17250	38.7106	0.000194647	174 - 237	specific	238096
SANT superfamily		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	-	38.7106	0.000194647	174 - 237	superfamily	266586
SANT		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	cl17250	38.7106	0.000194647	174 - 237	specific	238096
SANT superfamily		'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain...	-	38.7106	0.000194647	174 - 237	superfamily	266586

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
6481		Not available	150307	257892	Not available	Cre14.g632176.t1.1	AT5G41020.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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