PHATRDRAFT_48210 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48210	chr_16		522442	525442	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0365

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0116	0.40	900 1500

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
WW		Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids;...	cl00157	46.7522	1.19E-06	200 - 229	specific	238122
WW superfamily		Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids;...	-	46.7522	1.19E-06	200 - 229	superfamily	260224
CYCLIN superfamily		Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control....	-	43.6861	2.97E-05	709 - 837	superfamily	260157

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
264631		Not available	159321	212226	Not available	Not available	Not available	484745

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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