PHATRDRAFT_48625 urease accessory protein (UreD)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48625	chr_18	urease accessory protein (UreD)	421182	423182	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0131

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0077	0.23	31000 43000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
UreD		UreD urease accessory protein; UreD is a urease accessory protein. Urease pfam00449 hydrolyses urea...	cl00530	130.327	1.61E-34	81 - 275	specific	250853
UreD superfamily		UreD urease accessory protein; UreD is a urease accessory protein. Urease pfam00449 hydrolyses urea...	-	130.327	1.61E-34	81 - 275	superfamily	260481
UreF superfamily		UreF; This family consists of the Urease accessory protein UreF. The urease enzyme (urea...	-	93.1468	2.45E-21	416 - 666	superfamily	268170

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
1586		Not available	268087	243105	Not available	Not available	AT1G21840.1	533886

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments