PHATRDRAFT_48662 se1l1_mesauprotein sel-1 homolog 1 precursor (suppressor of lin-12-like protein 1) (sel-1l) (COG0790)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_48662 chr_18 se1l1_mesauprotein sel-1 homolog 1 precursor (suppressor of lin-12-like protein 1) (sel-1l) (... 511720 514716 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0075

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SEL1 Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. cl02723 40.62 0.000157777 401 - 433 specific 214772
Sel1 superfamily Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats. - 40.62 0.000157777 401 - 433 superfamily 261423
SEL1 Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences. cl02723 40.62 0.000157777 401 - 433 specific 214772
Sel1 superfamily Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats. - 40.62 0.000157777 401 - 433 superfamily 261423
COG0790 FOG: TPR repeat, SEL1 subfamily [General function prediction only] - 58.1319 3.26E-09 401 - 561 multi-dom 223861
COG0790 FOG: TPR repeat, SEL1 subfamily [General function prediction only] - 58.1319 3.26E-09 401 - 561 multi-dom 223861

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23332 Not available 181523 236676 Not available Not available AT1G18260.1 544024

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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