PHATRDRAFT_48799 patatin family (Pat_PLPL)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_48799 chr_19 patatin family (Pat_PLPL) 266681 269432 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0092

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0007
 0.60

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Pat_PLPL Patain-like phospholipase; Patatin-like phospholipase. This family consists of various patatin... cl11396 501.026 2.74E-169 335 - 762 specific 132870
Patatin_and_cPLA2 superfamily Patatins and Phospholipases; Patatin-like phospholipase. This family consists of various patatin... - 501.026 2.74E-169 335 - 762 superfamily 264349
RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only] - 90.1789 1.03E-19 418 - 704 multi-dom 224666

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
24883 Not available 192423 206772 470219 Not available Not available 261626

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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