PHATRDRAFT_48873 ga16037-pa isoform 1 (EEP superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_48873 chr_19 ga16037-pa isoform 1 (EEP superfamily) 538715 541278 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0265

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EEP superfamily Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; This large superfamily includes the... - 63.0909 7.23E-11 594 - 692 superfamily 260458
Mut7-C superfamily Mut7-C RNAse domain; RNAse domain of the PIN fold with an inserted Zinc Ribbon at the C terminus. - 88.0822 5.34E-20 375 - 525 superfamily 267854
EEP superfamily Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; This large superfamily includes the... - 63.0909 7.23E-11 594 - 692 superfamily 260458

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23277 Not available 136381 240109 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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